The detailed information of tRNA gene sequence


Sequence ID>SRA1028254
Genome IDSRR035086.285846
Search identical group
Phylum/Class454 Sequencing (SRP001807)
Species
Start position on genome 145
End posion on genome 55
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaagccgaaa
tRNA gene sequence 
GGAGAGGTGCCTGAGTGGCCGAAAGGACTTGTTTGCTAAATAAGCGTACCTCAAAAGGGT
ACCCTGGGTTCGAATCCCAGTCTCTCCACGA
Downstream region at tRNA end position 
aaaggagggg
Secondary structure (Cloverleaf model)
>SRA1028254	Ser	GCT
                   a      ACGA aaaggagggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G A C C C     A
      T G A        G      | | | | |     G
    G       G T C C       C T G G G     C
    G         | | |                 T T
    C       A A G G
      C G A        A     CGTACCTCAAAAGGGTACC
                    C - G
                    T - A
                    T - A
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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