The detailed information of tRNA gene sequence


Sequence ID>SRA1028275
Genome IDSRR035086.289186
Search identical group
Phylum/Class454 Sequencing (SRP001807)
Species
Start position on genome 224
End posion on genome 135
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccaaatataa
tRNA gene sequence 
GGAAGTGTGGCCGAGTCAGGCTTAAGGCGCTAGTCTTGAAAACTAGAGAACCGCAAGGTT
CCCAGGGTTCGAATCCCTGCGCTTCCGCCA
Downstream region at tRNA end position 
taataacgcc
Secondary structure (Cloverleaf model)
>SRA1028275	Ser	TGA
                   a      GCCA taataacgcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     G T C C C     A
    C T G A        G      | | | | |     G
  A         G C C G       C A G G G     C
  G           | | |                 T T
  G         A G G C
    C T T A        G     AGAACCGCAAGGTTCC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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