The detailed information of tRNA gene sequence


Sequence ID>SRA1028456
Genome IDSRR035086.329905
Search identical group
Phylum/Class454 Sequencing (SRP001807)
Species
Start position on genome 290
End posion on genome 216
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ttagcaccaa
tRNA gene sequence 
GGTTCCTTAGTGTAGTGGTTTATCACGTGTCCTTCACACGGGACAAGGTCGCCGGTTCGA
TCCCGGCAGGAACCAatc
Downstream region at tRNA end position 
aggttacatt
Secondary structure (Cloverleaf model)
>SRA1028456	Val	CAC
                   a      Aatc aggttacatt
                     G - C
                     G - C
                     T - A
                     T - A
                     C - G
                     C - G
                     T - A          C T
                    T     C G G C C     A
    G T G A        A      | | | | |     G
  G         T G T G       G C C G G     C
  T         | | + +                 T T
  T         A C G T
    T A T C        G     GGTC
                    T - A
                    C   A
                    C   C
                    T - A
                    T + G
                  C       G
                  A       G
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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