The detailed information of tRNA gene sequence


Sequence ID>SRA1028458
Genome IDSRR035086.331123
Search identical group
Phylum/Class454 Sequencing (SRP001807)
Species
Start position on genome 538
End posion on genome 454
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgggcacaag
tRNA gene sequence 
GCAGTCGTGGCCGAGTGGTTAAGGCGTTGGACTCGAAATCCAAAGGGGGTTTTCCCCCGC
GCAGGTTCGAATCCTGCCGGCTGCGtaa
Downstream region at tRNA end position 
tatatttttg
Secondary structure (Cloverleaf model)
>SRA1028458	Ser	CGA
                   g      Gtaa tatatttttg
                     G - C
                     C - G
                     A - T
                     G - C
                     T + G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     AGGGGGTTTTCCCCCGC
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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