The detailed information of tRNA gene sequence


Sequence ID>SRA1028559
Genome IDSRR035086.357378
Search identical group
Phylum/Class454 Sequencing (SRP001807)
Species
Start position on genome 355
End posion on genome 444
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tccctcaatc
tRNA gene sequence 
GGAGGATTGGCAGAGTGGTTGAATGCGATAGTTTTGAAAACTATTGACCGTTCGCGCGGT
CCGGGGGTTCGAATCCCTCATCCTCCGCCA
Downstream region at tRNA end position 
ttnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1028559	Ser	TGA
                   c      GCCA ttnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TGACCGTTCGCGCGGTCC
                    A - T
                    T - A
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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