The detailed information of tRNA gene sequence


Sequence ID>SRA1028778
Genome IDSRR035087.1553
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 188
End posion on genome 276
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaattttaat
tRNA gene sequence 
GGAAGATTGCTAGAGTGGCCCATTAGAACGGCTTGGAAAGCCGTGGTCGTTTATTCGGCC
CGGGGGTTCGAATCCTGTATCTTCCGCAA
Downstream region at tRNA end position 
ctaatacaaa
Secondary structure (Cloverleaf model)
>SRA1028778	Ser	GGA
                   t      GCAA ctaatacaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A          T A
                    T     T G T C C     A
      T G A        G      +   + | |     G
    G       G A T C       G G G G G     C
    G       + | | |                 T T
    C       T T A G
      C C A        A     GGTCGTTTATTCGGCCC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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