The detailed information of tRNA gene sequence


Sequence ID>SRA1028781
Genome IDSRR035087.2094
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 167
End posion on genome 78
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caaaaaacat
tRNA gene sequence 
GGAGAGGTCGCATAGTGGTCTAGTGCGCACGCTTGGAAAGCGTGTAAGGTCGCAAGATCT
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
attttcagaa
Secondary structure (Cloverleaf model)
>SRA1028781	Ser	GGA
                   t      GCCA attttcagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TAAGGTCGCAAGATCTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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