The detailed information of tRNA gene sequence


Sequence ID>SRA1028787
Genome IDSRR035087.6726
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 99
End posion on genome 9
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acatattttt
tRNA gene sequence 
GGAAAGGTGCCAGAGTGGTCGATCGGGCTCCCCTGCTAAGGGAGTGAACCGTTTTACGGT
TCCGAGGGTTCGAATCCCTCCTTTTCCGCCA
Downstream region at tRNA end position 
ttattgctnn
Secondary structure (Cloverleaf model)
>SRA1028787	Ser	GCT
                   t      GCCA ttattgctnn
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G       +   | |                 T T
    T       T C G G
      C G A        G     TGAACCGTTTTACGGTTCC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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