The detailed information of tRNA gene sequence


Sequence ID>SRA1028802
Genome IDSRR035087.10536
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 109
End posion on genome 200
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aataaataac
tRNA gene sequence 
GGAAACGTGGCTGAACGGCTTAAGGCATCTGTTTCGAAAGCAGACGGTCGGTGAAAGTTG
ACCTGGGGGTTCGAGTCCCTCCGTTTCCGCCA
Downstream region at tRNA end position 
acagaaaggg
Secondary structure (Cloverleaf model)
>SRA1028802	Ser	CGA
                   c      GCCA acagaaaggg
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     C - G
                     G - C          T G
                    T     C T C C C     A
      C A A        G      | + | | |     G
    G       G T C G       G G G G G     C
    G         + | |                 T T
    C       A G G C
      T T A        A     CGGTCGGTGAAAGTTGACCT
                    T - A
                    C - G
                    T - A
                    G - C
                    T + G
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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