The detailed information of tRNA gene sequence


Sequence ID>SRA1028826
Genome IDSRR035087.15886
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 227
End posion on genome 137
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnntttcT
tRNA gene sequence 
GGAGAAGTGTCCGAGTGGCTTTAAGGAGCGCGCTTGGAAAGCGTGTGTGCGTTTTTAGCG
TACCATGGGTTCGAATCCCATCTTCTCCGTtt
Downstream region at tRNA end position 
tttatattgc
Secondary structure (Cloverleaf model)
>SRA1028826	Ser	GGA
                   T      GTtt tttatattgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T A C C C     A
    G T G A        G      | | | | |     G
  G         G C C T       A T G G G     C
  C           | | |                 T T
  T         A G G A
    T T A          G     TGTGCGTTTTTAGCGTACC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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