The detailed information of tRNA gene sequence


Sequence ID>SRA1028861
Genome IDSRR035087.25119
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 212
End posion on genome 125
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttttaattaa
tRNA gene sequence 
GGAGAGGTGTCTGAGTGGCTTAAGGAGCACGCTTGGAAAGCGTGTGTGCAGCAATGTACC
GCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
ttaaacttcg
Secondary structure (Cloverleaf model)
>SRA1028861	Ser	GGA
                   a      GCCA ttaaacttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G C G G G     C
    G         + | |                 T T
    C       A G G A
      T T A        G     TGTGCAGCAATGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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