The detailed information of tRNA gene sequence


Sequence ID>SRA1028872
Genome IDSRR035087.27433
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 81
End posion on genome 172
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttttaactat
tRNA gene sequence 
GGAGGGGTACCGAAGCGGTCATAACGGGCTGGTCTCGAAAACCAAGCGATCTTTATTGGT
CACATGGGTTCGAATCCCATCCCCTCCCGCC
Downstream region at tRNA end position 
Aaccaatgtc
Secondary structure (Cloverleaf model)
>SRA1028872	Ser	CGA
                   t      CGCC Aaccaatgtc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
    G C G A        A      | | | | |     G
  G         A G C C       A T G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     GCGATCTTTATTGGTCAC
                    C   A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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