The detailed information of tRNA gene sequence


Sequence ID>SRA1029039
Genome IDSRR035087.64018
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 7
End posion on genome 100
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnatgttt
tRNA gene sequence 
GGAGAGGTGGCCGAGTATGGCTGAAGGCAGCCGCCTGCTAAGCGGTTGTAGGGGCATAAA
CCTCTACCGTGGGTTCGAATCCCACCCTCTCCGCtt
Downstream region at tRNA end position 
gcccactgat
Secondary structure (Cloverleaf model)
>SRA1029039	Ser	GCT
                   t      GCtt gcccactgat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    A T G A        G      | | | | |     G
  T         G C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    C T G A        A     TGTAGGGGCATAAACCTCTACC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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