The detailed information of tRNA gene sequence


Sequence ID>SRA1029067
Genome IDSRR035087.68996
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 3
End posion on genome 93
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnngt
tRNA gene sequence 
GGAGAGGTGACCGAGCTGGTTGAAGGTGTGCGCCTGCTAAGCGTATGTAGGGGAAACCTT
ACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gtttttatta
Secondary structure (Cloverleaf model)
>SRA1029067	Ser	GCT
                   t      GCCA gtttttatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C A       G A G G G     C
  G           | | |                 T T
  T         A G G T
    T G A          G     TGTAGGGGAAACCTTACC
                    T - A
                    G + T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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