The detailed information of tRNA gene sequence


Sequence ID>SRA1029341
Genome IDSRR035087.111561
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 104
End posion on genome 193
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttttcaagc
tRNA gene sequence 
GGAGGGATGGTCGAGTCTGGTTTAAGGCAGCGGTCTTGAAAACCGCCGAGGTGCAAGCCT
CCGTGGGTTCGAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
tttttttacc
Secondary structure (Cloverleaf model)
>SRA1029341	Ser	TGA
                   c      GCCA tttttttacc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  T         G C T G       G T G G G     C
  G           | + |                 T T
  G         A G G C
    T T T A        A     CGAGGTGCAAGCCTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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