The detailed information of tRNA gene sequence


Sequence ID>SRA1029364
Genome IDSRR035087.116035
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 8
End posion on genome 86
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnncacttga
tRNA gene sequence 
AGGAGTGTAGCATAATTGGCTAATGCGGCGGTCTCCAAAACCGTGTCATATCCGGGTTCA
ACTCCTGGCATTCCTGCCA
Downstream region at tRNA end position 
tttaaaaagg
Secondary structure (Cloverleaf model)
>SRA1029364	Trp	CCA
                   a      GCCA tttaaaaagg
                     A - T
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C          T C
                    T     G G T C C     A
      T A A        A      | | + | |     A
    T       T A C G       C C G G G     C
    G       | | | |                 T T
    G       A T G C
      C T A        G     GTCATAT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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