The detailed information of tRNA gene sequence


Sequence ID>SRA1029423
Genome IDSRR035087.125207
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 338
End posion on genome 264
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaccccataa
tRNA gene sequence 
AGCGGGGTGGAGCAGCGGCAGCTCGTCAGGTTCATACCCTGGAGGTCATAGGTTCAAATC
CTATTCCCGCAACCA
Downstream region at tRNA end position 
aatatttgca
Secondary structure (Cloverleaf model)
>SRA1029423	Met	CAT
                   a      ACCA aatatttgca
                     A   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     T A T C C     A
        G A        G      | | | | |     A
      C     C G A G       A T A G G     C
      G     | | | |                 T T
      G     G C T C
        C A        G     AGGTC
                    T + G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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