The detailed information of tRNA gene sequence


Sequence ID>SRA1029513
Genome IDSRR035087.139820
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 322
End posion on genome 233
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aatttttttc
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGACGAACGGGGCGGTCTCGAAAACCGTTGAACCTTTACGGGTT
CCGTGGGTTCGAATCCCACCCTCTCCGCTA
Downstream region at tRNA end position 
nattttttgc
Secondary structure (Cloverleaf model)
>SRA1029513	Ser	CGA
                   c      GCTA nattttttgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    A       A C G G
      C G A        G     TGAACCTTTACGGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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