The detailed information of tRNA gene sequence


Sequence ID>SRA1029514
Genome IDSRR035087.139931
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 249
End posion on genome 175
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gggagagttt
tRNA gene sequence 
GGATAATTAGCTCAGTTGGTTAGAGCGTTCGCTTCACATGCGAGAGGTCACTGGTTCGAG
TCCAGTATTGTCCACgg
Downstream region at tRNA end position 
gatgtttaaa
Secondary structure (Cloverleaf model)
>SRA1029514	Val	CAC
                   t      ACgg gatgtttaaa
                     G - C
                     G - C
                     A - T
                     T + G
                     A - T
                     A - T
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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