The detailed information of tRNA gene sequence


Sequence ID>SRA1029562
Genome IDSRR035087.145919
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 197
End posion on genome 123
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aataatttat
tRNA gene sequence 
GCAGGTGTAGTGTAGCGGTTAACATTTCTGATTCCAAACCAGACAACGAGGGTTCGAGTC
CTTTCACCTGTGCCA
Downstream region at tRNA end position 
attttccatc
Secondary structure (Cloverleaf model)
>SRA1029562	Trp	CCA
                   t      GCCA attttccatc
                     G + T
                     C - G
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T T T C C     A
      C G A        A      + | + | |     G
    G       T G T G       G A G G G     C
    G       | | | +                 T T
    T       A C A T
      T A          T     CAAC
                    T - A
                    C - G
                    T - A
                    G - C
                    A   C
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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