The detailed information of tRNA gene sequence


Sequence ID>SRA1029679
Genome IDSRR035087.162601
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 348
End posion on genome 263
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atttccttca
tRNA gene sequence 
GGAGGGGTGGCAGAGTGGACGATCGCACCGGTCTTGAAAACCGGCGTGCCGCAAGGCACC
GGGGGTTCGAATCCCTCCCCCTCCGCtt
Downstream region at tRNA end position 
cgcttcggca
Secondary structure (Cloverleaf model)
>SRA1029679	Ser	TGA
                   a      GCtt cgcttcggca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       +   | |                 T T
    A       T C G C
      C G A        A     CGTGCCGCAAGGCACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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