The detailed information of tRNA gene sequence


Sequence ID>SRA1029921
Genome IDSRR035087.202153
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 467
End posion on genome 378
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgaatgtct
tRNA gene sequence 
GGAGGGGTCGCATAGTGGCTTAGTGCGCTCGCTTGGAAAGCGGGTATACCTTTACGGGTA
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
atattaacca
Secondary structure (Cloverleaf model)
>SRA1029921	Ser	GGA
                   t      GCCA atattaacca
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    C       G T G C
      T T A        G     TATACCTTTACGGGTATC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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