The detailed information of tRNA gene sequence


Sequence ID>SRA1029987
Genome IDSRR035087.212091
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 113
End posion on genome 202
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ggtaaaatta
tRNA gene sequence 
GACGGTGTAGCCAAGTTGGTAAGGCAACAGTCTGCAAAACTGATTTGATCGTAATGATCG
TCGGGGGTTCAAATCCCTCCACCGTCTCCA
Downstream region at tRNA end position 
attaagagga
Secondary structure (Cloverleaf model)
>SRA1029987	Cys	GCA
                   a      TCCA attaagagga
                     G - C
                     A - T
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       A C C G       G G G G G     C
    G         | | |                 T T
    G       A G G C
      T A          A     TTTGATCGTAATGATCGTC
                    A   A
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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