The detailed information of tRNA gene sequence


Sequence ID>SRA1030022
Genome IDSRR035087.217440
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 78
End posion on genome 172
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaacatattT
tRNA gene sequence 
GGAGAGGTGGCAGAGCATGGTTGAATGCGGCGGATTGCTAATCCGTTGTACTGGTATAAG
CCGGTACCGAGGGTTCGAATCCCTCCCTCTCCGTaa
Downstream region at tRNA end position 
tattattttt
Secondary structure (Cloverleaf model)
>SRA1030022	Ser	GCT
                   T      GTaa tattattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    A C G A        G      | | | | |     G
  T         G A C G       G A G G G     C
  G           | | |                 T T
  G         A T G C
    T T G A        G     TGTACTGGTATAAGCCGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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