The detailed information of tRNA gene sequence


Sequence ID>SRA1030146
Genome IDSRR035087.233333
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 348
End posion on genome 276
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtcgaaaccc
tRNA gene sequence 
CTCCGAGTAGCCAAGTGGTTTAAGGCGGCTGGTTGCAACCCAGTTATCACAGGTTCGAAT
CCTGTCTCGGAGTtaa
Downstream region at tRNA end position 
agtacgaatc
Secondary structure (Cloverleaf model)
>SRA1030146	Cys	GCA
                   c      Ttaa agtacgaatc
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      T G A        A      | | | | |     G
    G       A C C G       A C A G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATC
                    G + T
                    C - G
                    T - A
                    G - C
                    G - C
                  T       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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