The detailed information of tRNA gene sequence


Sequence ID>SRA1030181
Genome IDSRR035087.239049
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 127
End posion on genome 52
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cacaatatat
tRNA gene sequence 
AGAAGTGTAGCTTAATTGGAAAAGCACTCGTCTCCAAAACGAGCAGATGTAAGTTCAAGT
CTTACTGCTTCTGCCA
Downstream region at tRNA end position 
gccgatgtaa
Secondary structure (Cloverleaf model)
>SRA1030181	Trp	CCA
                   t      GCCA gccgatgtaa
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G + T          T G
                    T     C A T T C     A
      T A A        A      | | | | |     A
    T       T T C G       G T A A G     C
    G       | | | |                 T T
    G       A A G C
      A A          A     CAGAT
                    C - G
                    T - A
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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