The detailed information of tRNA gene sequence


Sequence ID>W2010072682
Genome IDAUQX01000011
Search identical group
Phylum/ClassThermoproteota
SpeciesDesulfurococcus mucosus DSM 2161 [AUQX]
Start position on genome 16645
End posion on genome 16556
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ccggctggaT
tRNA gene sequence 
CCCGCCGTAGCTCAGCGGCAGAGCGCCCGGCTGTAGACCGGGTGGCCGGGGGTTCAAGTC
CCCCCGGCGGGATCC
Downstream region at tRNA end position 
ttattcaacg
Secondary structure (Cloverleaf model)
>W2010072682	Tyr	GTA
                   T      ATCC ttattcaacg
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     C C C C C     A
        G A        A      | | | | |     A
      C     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     TGGCC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G *
                    G T A
intron: position=38, length=14 (in A-loop)
TGAGGGGCGTAGAC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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