The detailed information of tRNA gene sequence


Sequence ID>W2010075079
Genome IDBBJO01000043
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalobellus rufus CBA1103 [BBJO]
Start position on genome 9388
End posion on genome 9318
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aattgtgtgc
tRNA gene sequence 
TGCGGGATAGGATAATGGCAGTCCACGGGGCTCATATCCCCGAGGCCCAGGTTCGACTCC
TGGTCCCGCAAtgg
Downstream region at tRNA end position 
aggacaacaa
Secondary structure (Cloverleaf model)
>W2010075079	Met	CAT
                   c      Atgg aggacaacaa
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T C
                    T     G G T C C     A
        A A        A      | | | | |     G
      T     T A G G       C C A G G     C
      G     + | | |                 T T
      G     G T C C
        C A        A     AGGC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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