The detailed information of tRNA gene sequence


Sequence ID>W2010075262
Genome IDBBMP01000007
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalococcus sediminicola CBA1101 [BBMP]
Start position on genome 102442
End posion on genome 102368
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aaacgcgata
tRNA gene sequence 
GCTCGGTTGGTGTAGTCCGGCCAATCATTTCGGCCTTTCGAGCCGATGACCGGGGTTCGA
ATCCCCGACCGAGCAtgg
Downstream region at tRNA end position 
attttcgagc
Secondary structure (Cloverleaf model)
>W2010075262	Glu	TTC
                   a      Atgg attttcgagc
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     G C C C C     A
    C T G A        G      | | | | |     G
  C         T G T G       C G G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        T     TGAC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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