The detailed information of tRNA gene sequence


Sequence ID>W2010153217
Genome IDCAAGTW010000007
Search identical group
Phylum/ClassMethanobacteriota
SpeciesMethanococcoides sp. NM1 [CAAGTW]
Start position on genome 106773
End posion on genome 106856
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acggcttttt
tRNA gene sequence 
GCCGAGGTAGTCTAGTGGTAGGGCGCAAGCCTGGAAAGCTTGTGGGGCCTGTCCCCTCGG
GAGTTCGAATCTCCCCCTCGGCGCtt
Downstream region at tRNA end position 
tgatcttatt
Secondary structure (Cloverleaf model)
>W2010153217	Ser	GGA
                   t      GCtt tgatcttatt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
        G A        A      | | | | |     G
      T     T C T G       G G G A G     C
      G     + | + |                 T T
      G     G G G C
        T A        G     TGGGGCCTGTCCCCTC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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