The detailed information of tRNA gene sequence


Sequence ID>W2010330448
Genome IDCACWTF010000019
Search identical group
Phylum/ClassMethanobacteriota
Speciesmethanogenic archaeon [CACWTF]
Start position on genome 2599
End posion on genome 2672
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
caggaacgtt
tRNA gene sequence 
GGGCCCGTGGGGTAGCTTGGTATCCTTGGAGCTTCGGGAGTTCTTGACTCCGGTTCAAAT
CCGGACGGGCCCACtc
Downstream region at tRNA end position 
attatttttt
Secondary structure (Cloverleaf model)
>W2010330448	Pro	CGG
                   t      ACtc attatttttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     A G G C C     A
      C G A        G      | | | | |     A
    T       T G G G       T C C G G     C
    T         | | +                 T T
    G       T C C T
      G T A        T     TGAC
                    G + T
                    G - C
                    A - T
                    G + T
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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