The detailed information of tRNA gene sequence


Sequence ID>W2010330450
Genome IDCACWTF010000022
Search identical group
Phylum/ClassMethanobacteriota
Speciesmethanogenic archaeon [CACWTF]
Start position on genome 5165
End posion on genome 5238
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aaatgcaact
tRNA gene sequence 
GTCGGGGTATCACAGTGGCTATGAGGGGGACTGCAGATCCTCATATGGGGGTTCGATTCC
CTCCCCCGACTCCA
Downstream region at tRNA end position 
ccttatttca
Secondary structure (Cloverleaf model)
>W2010330450	Cys	GCA
                   t      TCCA ccttatttca
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T T
                    T     C T C C C     A
        G A        A      | + | | |     G
      T     C A C T       G G G G G     C
      G       | | |                 T T
      G     A T G A
        C T        G     ATAT
                    G - C
                    G + T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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