The detailed information of tRNA gene sequence


Sequence ID>W2010340383
Genome IDCADAGG010000114
Search identical group
Phylum/ClassMethanobacteriota
Speciesmethanogenic archaeon [CADAGG]
Start position on genome 3123
End posion on genome 3196
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cgtatgctag
tRNA gene sequence 
GTCGGGGTATCACAGCGGCTATGAGCGGGACTGCAGATCCTGATATGGGGGTTCGACTCC
CTCCCCCGACTCCA
Downstream region at tRNA end position 
gcatcttttg
Secondary structure (Cloverleaf model)
>W2010340383	Cys	GCA
                   g      TCCA gcatcttttg
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T C
                    T     C T C C C     A
        G A        A      | + | | |     G
      C     C A C T       G G G G G     C
      G       | | |                 T T
      G     A T G A
        C T        G     ATAT
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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