The detailed information of tRNA gene sequence


Sequence ID>W2010659614
Genome IDJACASY010000013
Search identical group
Phylum/ClassNitrososphaerota
SpeciesMarine Group I thaumarchaeote D3 [JACASY]
Start position on genome 5242
End posion on genome 5316
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aacaaaattc
tRNA gene sequence 
GGATCCGTCGTCTAGCTTGGTTTGGATGCCGCACTCACACTGCGGAGGTCAAGGGTTCGA
ATCCCTTCGGATCCAttt
Downstream region at tRNA end position 
atcccttgag
Secondary structure (Cloverleaf model)
>W2010659614	Val	CAC
                   c      Attt atcccttgag
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
    T C G A        C      | | | | |     G
  T         T C T G       A A G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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