The detailed information of tRNA gene sequence


Sequence ID>SRA1030272
Genome IDSRR035087.254688
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 177
End posion on genome 105
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnnnnnggg
tRNA gene sequence 
NGGGGCTTAGCTTAGCTGGTAGAGCGTCTGATTTGCATTCAGAAGGTCAGGAGTTCGACT
CTCCTAGCCTCCAttt
Downstream region at tRNA end position 
aaacgcggtc
Secondary structure (Cloverleaf model)
>SRA1030272	Ala	TGC
                   g      Attt aaacgcggtc
                     N   C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     T - A          T C
                    T     T C C T C     A
      C G A        A      | | | | |     G
    T       T T C G       A G G A G     C
    G       + | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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