The detailed information of tRNA gene sequence


Sequence ID>W2010797702
Genome IDLYOS01000003
Search identical group
Phylum/ClassEuryarchaeota
SpeciesCandidatus Syntrophoarchaeum caldarius [LYOS]
Start position on genome 108542
End posion on genome 108616
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
atggaaatac
tRNA gene sequence 
GCTCCGTTAGTGTAGCTCGGCCAATCATGCAGGGCTCTCAATCCTGCGACAGGGGTTCAA
ATCCCCTACGGAGCAttt
Downstream region at tRNA end position 
aataaagaag
Secondary structure (Cloverleaf model)
>W2010797702	Glu	CTC
                   c      Attt aataaagaag
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T C C C C     A
    T C G A        A      | | | | |     A
  C         T G T G       A G G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        G     CGAC
                    C - G
                    A - T
                    G - C
                    G - C
                    G + T
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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