The detailed information of tRNA gene sequence


Sequence ID>W2010887232
Genome IDMNEV01000020
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrososphaera sp. 13_1_40CM_48_12 [MNEV]
Start position on genome 7516
End posion on genome 7425
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gaataactgc
tRNA gene sequence 
GGTGGGGTGGCAGAGCGGCCATGCGTTCGCCTGCAGAGCGGATTTATAGGGGTTCGAATC
CCCTCCCCACCTCCA
Downstream region at tRNA end position 
aactcatcgg
Secondary structure (Cloverleaf model)
>W2010887232	Cys	GCA
                   c      TCCA aactcatcgg
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C C C C     A
        G A        G      | | | | |     G
      C     G A C G       A G G G G     C
      G       | | |                 T T
      G     A T G C
        C C        G     TTTAT
                    T - A
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G *
                    G C A
intron: position=38, length=17 (in A-loop)
ATCGCATGTCAGCAGTC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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