The detailed information of tRNA gene sequence


Sequence ID>SRA1030331
Genome IDSRR035087.264545
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 340
End posion on genome 255
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attttcaaat
tRNA gene sequence 
GGAGGATTAGTCCTAATTGGTAAGGCAGCGGTCTTGAAAACCGCCGGGCTCTGCCCTTGG
GGGTTCGAGTCCCTCATCCTCCGCCA
Downstream region at tRNA end position 
ttttgtcttt
Secondary structure (Cloverleaf model)
>SRA1030331	Ser	TGA
                   t      GCCA ttttgtcttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T G
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C C T G       G G G G G     C
    T         | + |                 T T
    G       A G G C
      G T A        A     CGGGCTCTGCCCTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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