The detailed information of tRNA gene sequence


Sequence ID>W2011230911
Genome IDPXYB01000014
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus sp. b1 [PXYB]
Start position on genome 12416
End posion on genome 12493
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttgtttctaa
tRNA gene sequence 
GGGGCCGTCGTCTAGTTTGGCTATGATGCTAGCCTGGGGTGCTAGAGGTCGCAGGTTCAA
ATCCTGCCGGTCCCACCA
Downstream region at tRNA end position 
tcatacaatt
Secondary structure (Cloverleaf model)
>W2011230911	Pro	GGG
                   a      ACCA tcatacaatt
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
    T T G A        C      | | | | |     A
  T         T C T G       G C A G G     C
  G           | | +                 T T
  G         T G A T
    C T A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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