The detailed information of tRNA gene sequence


Sequence ID>W2011230917
Genome IDPXYB01000020
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus sp. b1 [PXYB]
Start position on genome 47362
End posion on genome 47287
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tttttaacaa
tRNA gene sequence 
GCTCCTGTGGTGTAGTCCGGCTAAGCATACTGCCCTCTCAAGGCAGTGATCCCGGGTTCA
AATCCCGGCGGGAGCAtta
Downstream region at tRNA end position 
gttattttat
Secondary structure (Cloverleaf model)
>W2011230917	Glu	CTC
                   a      Atta gttattttat
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     G G C C C     A
    C T G A        G      | | | | |     A
  C         T G T G       C C G G G     C
  G         + | | +                 T T
  G         G C A T
    C T A A        A     TGATC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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