The detailed information of tRNA gene sequence


Sequence ID>W2011230932
Genome IDPXYB01000078
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus sp. b1 [PXYB]
Start position on genome 899
End posion on genome 994
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tagattcttT
tRNA gene sequence 
GGACCGGTCGTCTAGTGGCTAGGATGACGCACTCACACTGCGTAAGGAAATAAAATTCCC
GCAAGGGTCATGGGTTCAAATCCCATCCGGTCCATta
Downstream region at tRNA end position 
tttttaaaaa
Secondary structure (Cloverleaf model)
>W2011230932	Val	CAC
                   T      ATta tttttaaaaa
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        C      | | | | |     A
    G       T C T G       A T G G G     C
    G       + | | +                 T T
    C       G G A T
      T A          G     AAGGAAATAAAATTCCCGCAAGGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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