The detailed information of tRNA gene sequence


Sequence ID>W2011230956
Genome IDPXYC01000010
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus sp. b2 [PXYC]
Start position on genome 32893
End posion on genome 32810
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tagattaatT
tRNA gene sequence 
GCCGGGATAGCCAAGTGGTAAGGCGGCCGTCTCGAAAACGGCTACGTGCAAGCGTGCAGG
GGTTCGAATCCCTTTCCCGGCGTta
Downstream region at tRNA end position 
ttttgcagta
Secondary structure (Cloverleaf model)
>W2011230956	Ser	CGA
                   T      GTta ttttgcagta
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     T T C C C     A
        G A        A      | + | | |     G
      T     A C C G       A G G G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TACGTGCAAGCGTGC
                    G - C
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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