The detailed information of tRNA gene sequence


Sequence ID>W2011236679
Genome IDQBUM01000193
Search identical group
Phylum/ClassMethanobacteriota
SpeciesANME-1 cluster archaeon GoMg2 [QBUM]
Start position on genome 6100
End posion on genome 6025
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcattatagT
tRNA gene sequence 
GGGGTCGTGGCCTAGTCCGGAAGGGCAGCGGGCTCCAGACTCGCCGACCGTGCGTTCAAA
TCGCACCGACCCCATat
Downstream region at tRNA end position 
tttctttttc
Secondary structure (Cloverleaf model)
>W2011236679	Trp	CCA
                   T      ATat tttctttttc
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C A C G C     A
      T G A        G      | | | | |     A
    C       T C C G       G T G C G     C
    C       + | | |                 T T
    G       G G G C
      G A A        A     CGACC
                    G - C
                    C - G
                    G - C
                    G + T
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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