The detailed information of tRNA gene sequence


Sequence ID>W2011236689
Genome IDQBUM01000242
Search identical group
Phylum/ClassMethanobacteriota
SpeciesANME-1 cluster archaeon GoMg2 [QBUM]
Start position on genome 24154
End posion on genome 24069
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atcaatagga
tRNA gene sequence 
GCCAGGGTGGCAGAGCGGACAAATGCGGTGGCCTCGAGAGCCATTGTCCCGTAAGGGGCG
CTCAGGTTCAAATCCTGACCCTGGCGttc
Downstream region at tRNA end position 
tccctttata
Secondary structure (Cloverleaf model)
>W2011236689	Ser	CGA
                   a      Gttc tccctttata
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     A G T C C     A
      C G A        G      | | | | |     A
    G       G A C G       T C A G G     C
    G         | | |                 T T
    A       A T G C
      C A A        G     TGTCCCGTAAGGGGCGC
                    G + T
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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