The detailed information of tRNA gene sequence


Sequence ID>W2011248947
Genome IDQFVV01000016
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus sp. A20-N-G8 [QFVV]
Start position on genome 2787
End posion on genome 2879
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ttataatcgt
tRNA gene sequence 
GCCGCCGTAGCTCAGCCTGGTTAGAGCGCCGGCCTTGTAAGCCGGCGGTCGCGGGTTCAA
ATCCCGCCGGCGGCtctt
Downstream region at tRNA end position 
ctaaatattt
Secondary structure (Cloverleaf model)
>W2011248947	Thr	TGT
                   t      tctt ctaaatattt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
    C C G A        A      | | | | |     A
  T         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     CGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    T G T
intron: position=38, length=18 (in A-loop)
AGTTAGAAGGCCTAAGAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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