The detailed information of tRNA gene sequence


Sequence ID>W2011249163
Genome IDQFWC01000060
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus sp. F3 [QFWC]
Start position on genome 703
End posion on genome 609
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tcttacttaa
tRNA gene sequence 
GGGCCCGTAGCTTAGCCAGGTAGAGCGACGGGCTCTTAACCCGTAGGTCCCGGGTTCGAA
TCCCGGCGGGCCCGCgc
Downstream region at tRNA end position 
ttcattatta
Secondary structure (Cloverleaf model)
>W2011249163	Lys	CTT
                   a      GCgc ttcattatta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    C       T T C G       C C G G G     C
    A       + | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A *
                    C T T
intron: position=38, length=20 (in A-loop)
ACCTAATGCGAGGTAGAGAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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