The detailed information of tRNA gene sequence


Sequence ID>SRA1030381
Genome IDSRR035087.272145
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 275
End posion on genome 203
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccttttttat
tRNA gene sequence 
GCGGAGATGGCACAGCGGTTACTGCGTTCGGCTGCAACCCGGATTTTCGTGGGTTCGAGT
CCCACTCTCCGCTtat
Downstream region at tRNA end position 
gactttgaaa
Secondary structure (Cloverleaf model)
>SRA1030381	Cys	GCA
                   t      Ttat gactttgaaa
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T          T G
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       C A C G       G T G G G     C
    G         | | |                 T T
    T       C T G C
      T A          G     TTTTC
                    T - A
                    T + G
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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