The detailed information of tRNA gene sequence


Sequence ID>W2011354276
Genome IDRAPO01000006
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHalopiger aswanensis DSM 13151 [RAPO]
Start position on genome 32990
End posion on genome 32916
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
gggtgcgagc
tRNA gene sequence 
GGGCCCTTAGCTCAGTCTGGTTAGAGCGCTCGGCTCATAACCGAGTGGTCAATGGTTCGA
ATCCGTTAGGGCCCAtca
Downstream region at tRNA end position 
acttactcga
Secondary structure (Cloverleaf model)
>W2011354276	Ile2	CAT
                   c      Atca acttactcga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T T G C C     A
    C T G A        A      | | + | |     G
  T         C T C G       A A T G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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