The detailed information of tRNA gene sequence


Sequence ID>W2011401226
Genome IDRCMB01000001
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosotalea sp. TS [RCMB]
Start position on genome 22555
End posion on genome 22471
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaaaagtatt
tRNA gene sequence 
GCAGAGGTCGCCTAGCCCGGCATGGCGTGGGCCTTGAGAGCCTATGTGCGCAAGCACCCG
GGGGTTCAAATCCCTCTCTCTGCGCta
Downstream region at tRNA end position 
tactctacta
Secondary structure (Cloverleaf model)
>W2011401226	Ser	TGA
                   t      GCta tactctacta
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      | + | | |     A
    C       T C C G       G G G G G     C
    C         | | |                 T T
    G       T G G C
      G C A        G     TGTGCGCAAGCACCC
                    T - A
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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