The detailed information of tRNA gene sequence


Sequence ID>W2011401249
Genome IDRCMC01000199
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosotalea sp. FS [RCMC]
Start position on genome 48262
End posion on genome 48189
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caacatctgt
tRNA gene sequence 
GCGGGGGTCGCCTAGCCTGGTAGGGCGTGGGATTGCTAATCCCATGTNGTGGGTTCGAAT
CCCACTCCCCGCGCtt
Downstream region at tRNA end position 
tttgcgatct
Secondary structure (Cloverleaf model)
>W2011401249	Ser	GCT
                   t      GCtt tttgcgatct
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C A C C C     A
      C G A        C      | | | | |     G
    C       T C C G       G T G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTN
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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